Candida auris A-C
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Description:
This template outlines a workflow for characterizing Candida auris isolates from a patient blood sample, starting with identification via CHROMagar Candida and VITEK2-MS. It continues through DNA extraction and fluorescent probe hybridization, whole genome sequencing revealing clade classification and SNP counts (1,979-3,447), and antifungal susceptibility testing against fluconazole (FLZ) and amphotericin B (AmB).
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This template outlines a workflow for characterizing Candida auris isolates from a patient blood sample, starting with identification via CHROMagar Candida and VITEK2-MS. It continues through DNA extraction and fluorescent probe hybridization, whole genome sequencing revealing clade classification and SNP counts (1,979-3,447), and antifungal susceptibility testing against fluconazole (FLZ) and amphotericin B (AmB).