Long-read DNA Sequencing Data Analysis
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Description:
This template outlines a four-step workflow for analyzing long-read DNA sequencing data, covering genome data preprocessing with tools like GenomeScope and FastQC, genome assembly and quality assessment with tools like Canu and BUSCO. It continues through read alignment and structural variant detection with tools like Minimap2 and Sniffles2, ending with genome annotation and visualization using tools like Augustus and IGV.
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This template outlines a four-step workflow for analyzing long-read DNA sequencing data, covering genome data preprocessing with tools like GenomeScope and FastQC, genome assembly and quality assessment with tools like Canu and BUSCO. It continues through read alignment and structural variant detection with tools like Minimap2 and Sniffles2, ending with genome annotation and visualization using tools like Augustus and IGV.